PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G188100.1
Common NamePHAVU_009G188100g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family TCP
Protein Properties Length: 386aa    MW: 42151.2 Da    PI: 7.0715
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G188100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP131.58.1e-41822152109
                 TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg... 88 
                         ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++  + s++ss+s+ s +   
  Phvul.009G188100.1  82 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISHRSSGSSISVPsql 172
                         789******************************************************************9997666666666633333555 PP

                 TCP  89 ..................................kaaksaakskksqksaasaln 109
                                                           +  +            +s+ +
  Phvul.009G188100.1 173 rsnyfnsnfslqprrslflentntsttllnfqsnNPIS------------TSMFQ 215
                         55666666777777777777554444444443332222............22222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.7E-4186246IPR005333Transcription factor, TCP
PROSITE profilePS5136927.50588142IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MEGGDDFHHH HHHHHHHHQH RQDFPFQLLE KKEDQDPSSC STSSPYPSLA ISAEPSTSNS  60
TPSNNNTALI PTQSESSPKK PPPKRTSTKD RHTKVDGRGR RIRMPALCAA RVFQLTRELG  120
HKSDGETIEW LLQQAEPSVI AATGTGTIPA NFTSLNISHR SSGSSISVPS QLRSNYFNSN  180
FSLQPRRSLF LENTNTSTTL LNFQSNNPIS TSMFQPKHEL RDSSSLDLSS ENNEEGLGRK  240
RRPLEQDLSS TMQHQVGSYL MQSSSSGTIP ESHAQIPANI WMVANSNSQG VSGEAPLWTF  300
PGVSNSALYR GNMSSGLHFM NFPTPMALLP GQQLGSSGIG GNINEGHLSM LSGLNPYRTV  360
IGVSESQASE SHSHHGGSED RHDDN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138192.10.0hypothetical protein PHAVU_009G188100g
SwissprotQ93Z002e-64TCP14_ARATH; Transcription factor TCP14
TrEMBLV7B1710.0V7B171_PHAVU; Uncharacterized protein
STRINGGLYMA04G33771.11e-170(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.18e-38TCP family protein